Table 1 List of identified peptides

Higher signal intensities in LS and VS

 1433B_MOUSE

14-3-3 protein beta/alpha

L.WTSENQGDEGDAGEGEN.-

230–246

 1433Z_MOUSE

14-3-3 protein zeta/delta

L.WTSDTQGDEAEAGEGGEN.-

228–245

 RLA2_MOUSE

60S acidic ribosomal protein P2

-.MRYVASYLLAALGGN.S

1–15

 ATPB_MOUSE

ATP synthase subunit beta, mitochondrial

A.AQASAAPKAGTATGRIVA.V

48–65

 ATPB_MOUSE

ATP synthase subunit beta, mitochondrial

Y.AAQASAAPKAGTATGRIVA.V

47–65

 ATP5H_MOUSE

ATP synthase subunit d, mitochondrial

M.AGRKLALKTIDWVSF.V + Acetyl (N-term)

2–16

 KCRB_MOUSE

Creatine kinase B-type

L.IEMEQRLEQGQAIDDLMPAQK.-

361–381

 IF4H_MOUSE

Eukaryotic translation initiation factor 4H

N.SAIFGGARPREEVVQKEQE.-

230–248

 IF4H_MOUSE

Eukaryotic translation initiation factor 4H

M.ADFDTYDDRAYSS.F + acetyl (N-term)

2–14

 G3P_MOUSE

Glyceraldehyde-3-phosphate dehydrogenase

N.RVVDLMAYMASKE.-

321–333

 G3P_MOUSE

Glyceraldehyde-3-phosphate dehydrogenase

M.FQYDSTHGKFNGTVKAEN.G

45–62

 G3P_MOUSE

Glyceraldehyde-3-phosphate dehydrogenase

L.ISWYDNEYGYSNRVVDLMAYMASKE.-

309–333

 G3P_MOUSE

Glyceraldehyde-3-phosphate dehydrogenase

M.VKVGVNGFGRIGRLVTRA.A

2–19

 G3P_MOUSE

Glyceraldehyde-3-phosphate dehydrogenase

M.VKVGVNGFGRIGRLVT.R

2–17

 GBB2_MOUSE

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2

M.SELEQLRQEAEQLRN.Q + acetyl (N-term)

2–16

 ESTD_MOUSE

S-Formylglutathione hydrolase

T.FIADHIRHHAKYLNA.-

268–282

 TPIS_MOUSE

Triosephosphate isomerase

M.APTRKFFVGGN.W

52–62

 G6PI_MOUSE

Glucose-6-phosphate isomerase

M.AALTRNPQFQKLLEWHRAN.S + acetyl (N-term)

2–20

 G6PI_MOUSE

Glucose-6-phosphate isomerase

N.GLISFIKQQRDTKLE.-

544–558

Higher signal intensities in VS, LC, VC

 DPYL2_MOUSE

Dihydropyrimidinase-related protein 2

S.SAKTSPAKQQAPPVRNLH.Q

518–535

 DPYL2_MOUSE

Dihydropyrimidinase-related protein 2

V.APPGGRANITS.L

560–570

 DPYL2_MOUSE

Dihydropyrimidinase-related protein 2

V.APPGGRANITSLG.-

560–572

 EAA2_MOUSE

Excitatory amino acid transporter 2

M.ASTEGANNMPKQVEVRMHDSHLS.S + acetyl (N-term)

2–24

 EAA2_MOUSE

Excitatory amino acid transporter 2

M.ASTEGANNMPKQVEVRMHDSH.L + acetyl (N-term)

2–22

 MBP_MOUSE

Myelin basic protein

V.TPRTPPPSQGKG.R

93–104

 MBP_MOUSE

Myelin basic protein

R.TPPPSQGKGRGLS.L

96–108

 MBP_MOUSE

Myelin basic protein

I.VTPRTPPPSQGKG.R

92–104

 MBP_MOUSE

Myelin basic protein

N.IVTPRTPPPSQGKGRGLSLS.R

91–110

 MBP_MOUSE

Myelin basic protein

N.IVTPRTPPPSQGKG.R

91–104

 MBP_MOUSE

Myelin basic protein

R.TPPPSQGKGRGLSLS.R

96–110

 MBP_MOUSE

Myelin basic protein

V.TPRTPPPSQGKGRGLSLS.R

93–110

 MBP_MOUSE

Myelin basic protein

K.RPSQRSKYLATA.S

6–17

 MBP_MOUSE

Myelin basic protein

Q.KRPSQRSKYLATA.S

5–17

 MBP_MOUSE

Myelin basic protein

M.ASQKRPSQRSKYLAT.A + acetyl (N-term)

2–16

 MBP_MOUSE

Myelin basic protein

M.ASQKRPSQRSKYLATA.S + acetyl (N-term)

2–17

 MBP_MOUSE

Myelin basic protein

M.ASQKRPSQRSKYLATAS.T + acetyl (N-term)

2–18

 MBP_MOUSE

Myelin basic protein

M.ASQKRPSQRSKYLATAST.M + acetyl (N-term)

2–19

 MBP_MOUSE

Myelin basic protein

M.ASQKRPSQRSKYLATASTMD.H + acetyl (N-term); oxidation (M)

2–21

 MBP_MOUSE

Myelin basic protein

M.ASQKRPSQRSKYLATASTMDH.A + acetyl (N-term); oxidation (M)

2–22

 MBP_MOUSE

Myelin basic protein

M.ASQKRPSQRSKYLATASTMDHA.R + acetyl (N-term)

2–23

 MAG_MOUSE

Myelin-associated glycoprotein

G.KRPTKDSYTLTEELAEY.A

604–620

 NEUG_MOUSE

Neurogranin

K.GPGPGGPGGAGGARG.G

55–69

 NEUG_MOUSE

Neurogranin

P.GGPGGAGGARGGAGGGPSGD.-

59–78

 NEUG_MOUSE

Neurogranin

R.KGPGPGGPGGAGGARGGAGGGP.S

54–75

 NEUG_MOUSE

Neurogranin

K.GPGPGGPGGAGGARGGAGGGPSGD.-

55–78

 NEUG_MOUSE

Neurogranin

R.KGPGPGGPGGAGGARGGAGGGPSGD.-

54–78

 NEUG_MOUSE

Neurogranin

G.RKGPGPGGPGGAGGARGGAGGGPSGD.-

53–78

 SNG3_MOUSE

Synaptogyrin-3

A.YPGYPVGSGVEGTETY.Q

193–208