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Table 3 Genes significantly up-regulated in diabetes vehicle-treated vs. control vehicle-treated group on DNA microarray

From: The effect of a preparation of minerals, vitamins and trace elements on the cardiac gene expression pattern in male diabetic rats

   

Diabetes Vehicle

Diabetes MVT

Control MVT

vs.

vs.

vs.

Control Vehicle

Diabetes Vehicle

Control Vehicle

Gene function

Gene Name provided by RGD a

Acc. Number

Gene Symbol

Log2 (SD)

Corr. p

Fold change

Log2 (SD)

Fold Change

Log2 (SD)

Fold Change

Metabolism

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15

XM_003752864

Galnt15

0.85 (0.53)

0.047

1.81

−0.58 (0.40)

−1.49

0.32 (0.55)

1.25

Metabolism

microtubule associated monooxygenase, calponin and LIM domain containing 1

NM_001106397

Mical1

0.89 (0.23)

0.007

1.86

−0.21 (0.19)

−1.16

0.52 (0.23)

1.43

Metabolism

proline dehydrogenase (oxidase) 1

NM_001135778

Prodh

0.95 (0.48)

0.026

1.93

−0.27 (0.63)

−1.21

0.93 (0.50)

1.91

Metabolism

4-hydroxyphenylpyruvate dioxygenase

NM_017233

Hpd

1.07 (0.38)

0.011

2.09

−0.06 (0.34)

−1.04

1.00 (0.48)

2.01

Stress response

glutathione S-transferase, theta 3

NM_001137643

Gstt3

0.88 (0.52)

0.042

1.84

−0.13 (0.38)

−1.09

0.61 (0.80)

1.52

Stress response

heme oxygenase (decycling) 1

NM_012580

Hmox1

1.08 (0.47)

0.017

2.12

−0.62 (0.49)

−1.54

0.52 (0.25)

1.43

Stress response

metallothionein 1a

NM_138826

Mt1a

1.32 (0.34)

0.005

2.49

−1.18 (0.43)

−2.26

0.09 (0.39)

1.06

Stress response

metallothionein 2a

NM_001137564

Mt2a

1.61 (0.34)

0.003

3.06

−1.70 (0.66)

−3.24

0.24 (0.53)

1.18

Immune response

NLR family member X1

NM_001025010

Nlrx1

0.87 (0.48)

0.036

1.83

−1.07 (0.43)

−2.10

0.30 (0.43)

1.23

Immune response

FK506 binding protein 5

NM_001012174

Fkbp5

1.13 (0.52)

0.020

2.19

−1.09 (0.32)

−2.13

0.83 (0.74)

1.77

Immune response

influenza virus NS1A binding protein

NM_001047085

Ivns1abp

1.27 (0.40)

0.008

2.41

−0.65 (0.35)

−1.57

0.68 (0.79)

1.60

Apoptosis/necrosis and inflammation

interleukin 6 receptor

NM_017020

Il6r

0.91 (0.50)

0.034

1.88

−1.00 (0.47)

−2.00

0.63 (0.67)

1.54

Cell growth and differentiation

H19, imprinted maternally expressed transcript

NR_027324

H19

0.92 (0.49)

0.032

1.89

−0.53 (0.47)

−1.44

1.16 (0.44)

2.24

Cell growth and differentiation

secreted frizzled-related protein 2

NM_001100700

Sfrp2

1.22 (0.73)

0.039

2.34

−0.62 (0.77)

−1.54

0.87b (0.73)

1.83

Cell growth and differentiation

wingless-type MMTV integration site family, member 2B

NM_001191848

Wnt2b

1.32 (0.11)

0.003

2.50

−1.66 (0.48)

−3.15

0.16 (0.11)

1.11

Cell growth and differentiation

brain expressed, X-linked 1

NM_001037365

Bex1

1.41 (0.30)

0.003

2.65

−1.97 (0.45)

−3.92

0.25 (0.81)

1.19

Cell growth and differentiation

N-myc downstream regulated 1

NM_001011991

Ndrg1

0.85 (0.42)

0.027

1.81

−1.05 (0.33)

−2.07

0.41 (0.62)

1.33

Receptors and ion channels

solute carrier family 26 (anion exchanger), member 3

NM_053755

Slc26a3

0.88 (0.34)

0.015

1.84

−0.03 (0.23)

−1.02

0.01 (0.32)

1.01

Receptors and ion channels

ATPase, H+ transporting, lysosomal V1 subunit G2

NM_212490

Atp6v1g2

0.92 (0.41)

0.020

1.89

−1.05 (0.43)

−2.06

−0.75 (0.22)

−1.68

Receptors and ion channels

ATP-binding cassette, subfamily A (ABC1), member 1

NM_178095

Abca1

1.01 (0.35)

0.011

2.01

−0.22 (0.39)

−1.17

0.54 (0.40)

1.45

Receptors and ion channels

sarcolipin

NM_001013247

Sln

1.07 (0.61)

0.036

2.10

−0.23 (0.42)

−1.17

1.09 (0.61)

2.13

Signal transduction, regulation of transcription

zinc finger and BTB domain containing 16

NM_001013181

Zbtb16

0.89 (0.29)

0.011

1.85

−0.69 (0.33)

−1.62

0.37 (0.52)

1.30

Signal transduction, regulation of transcription

Rho-related BTB domain containing 1

NM_001107622

Rhobtb1

0.91 (0.25)

0.008

1.88

−0.22 (0.25)

−1.16

0.58 (0.55)

1.49

Signal transduction, regulation of transcription

connector enhancer of kinase suppressor of Ras 1

NM_001039011

Cnksr1

1.31 (0.67)

0.025

2.48

−1.64 (0.38)

−3.13

0.39 (0.72)

1.31

Signal transduction, regulation of transcription

cytochrome P450, family 26, subfamily b, polypeptide 1

NM_181087

Cyp26b1

1.62 (0.28)

0.003

3.08

−1.68 (0.47)

−3.20

0.25 (0.30)

1.19

Structural protein, cell adhesion

pannexin 2

NM_199409

Panx2

0.97 (0.17)

0.003

1.96

−0.56 (0.33)

−1.47

0.81 (0.15)

1.75

Structural protein, cell adhesion

myosin light chain kinase 2

NM_057209

Mylk2

1.17 (0.32)

0.006

2.25

−0.05 (0.37)

−1.03

1.05b (0.69)

2.08

Hormones

resistin

NM_144741

Retn

1.08 (0.60)

0.034

2.12

−1.03 (0.44)

−2.05

0.51 (0.96)

1.43

Hormones

galanin/GMAP prepropeptide

NM_033237

Gal

2.41 (1.15)

0.018

5.31

−2.99 (0.92)

−7.96

1.82b (1.20)

3.53

Hormones

natriuretic peptide A

NM_012612

Nppa

1.23 (0.45)

0.011

2.34

−0.62 (0.42)

−1.54

0.79 (0.38)

1.73

Others

myosin binding protein H-like

NM_001014042

Mybphl

1.26 (0.75)

0.038

2.39

−0.66 (0.68)

−1.58

1.09b (0.71)

2.13

Others

prostaglandin D2 synthase (brain)

NM_013015

Ptgds

1.32 (0.69)

0.026

2.50

−0.64 (0.46)

−1.56

0.67 (0.87)

1.59

Others

visinin-like 1

NM_012686

Vsnl1

1.49 (0.79)

0.026

2.80

−1.01b (0.77)

−2.01

1.16b (0.76)

2.24

Others

transmembrane protein 140

NM_001009709

Tmem140

1.49 (0.27)

0.003

2.80

−0.59 (0.42)

−1.50

0.30 (0.26)

1.23

Others

IQ motif and ubiquitin domain containing

NM_001034130

Iqub

0.94 (0.36)

0.014

1.91

0.23 (0.20)

42021

0.52 (0.59)

1.44

Others

similar to apolipoprotein L2; apolipoprotein L-II

NM_001134801

RGD1309808

4.33 (2.91)

0.049

42358

−6.07 (0.68)

−67.24

1.61b (3.76)

3.05

Others

thioredoxin domain containing 16

XM_001072487

Txndc16

0.85 (0.31)

0.015

1.80

−0.72 (0.32)

−1.65

0.51 (0.32)

1.42

  1. Values show gene expression. Log2 ratio reaching at least ±0.85 and p < 0.05 were considered as significant alterations
  2. aRGD: rat genome database
  3. bnon significant change (p > 0.05)