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Table 2 Nominally significant results for the GWAS and imputation SNPs with measures of CVD and lipids

From: Analysis of common and coding variants with cardiovascular disease in the diabetes heart study

    Additive Dominant Recessive
SNP Gene Trait P-value β value SE P-value β value SE P-value β value SE
rs1746048 CXCL12 All-cause mortality 0.005 0.29 0.12 0.005 0.32 0.12 0.28 0.43 0.44
rs599839 PSRC1 CAC 0.008 −0.31 0.12 0.009 −0.36 0.14 0.27 −0.36 0.32
rs646776 CELSR2, PSRC1, SORT1 CAC 0.013 −0.31 0.12 0.010 −0.38 0.15 0.41 −0.28 0.34
rs17398575 PIK3CG AACP 0.015 8.74 3.58 0.009 11.03 4.20 0.60 4.85 9.33
rs3809346 COL4A1, COL4A2 CVD-cause mortality 0.026 −0.18 0.08 0.36 −0.11 0.12 0.004 −0.39 0.14
rs4773144 COL4A1, COL4A2 CVD-cause mortality 0.040 −0.16 0.08 0.43 −0.095 0.12 0.007 −0.38 0.14
  1. Associations were examined under additive, dominant and recessive genetic models. CAC = coronary artery calcified plaque; AACP = infrarenal abdominal aortic calcified plaque SE = standard error.