| SNPs in risk scores 1a and 1b | |||||||
---|---|---|---|---|---|---|---|---|
SNP | Chr | Position | Gene(s) | Source | Alleles (Major/Minor) | Effect Allele | Effect Allele Frequency DHS | Effect (βvalue) in mmol/L |
rs1689800 | 1 | 182168885 | GLUL, ZNF648 | Exome Chip | A/G | A | 0.628 | 0.01 |
rs13107325 | 4 | 103188709 | SLC39A8 | Exome Chip | C/T | C | 0.925 | 0.02 |
rs2293889 | 8 | 116599199 | TRPS1 | Sequenom | G/T | G | 0.554 | 0.01 |
rs2923084 | 11 | 10388782 | AMPD3 | Exome Chip | A/G | A | 0.815 | 0.01 |
rs7134594 | 12 | 110000193 | MMAB | Exome Chip | T/C | T | 0.520 | 0.01 |
rs4759375 | 12 | 123796238 | SBNO1 | Imputed data | C/T | T | 0.092 | 0.02 |
rs838880 | 12 | 125261593 | SCARB1 | Exome Chip | T/C | C | 0.337 | 0.02 |
rs16942887 | 16 | 67928042 | PSKH1 | Exome Chip | G/A | A | 0.115 | 0.03 |
rs881844 | 17 | 37810218 | STARD3 | Imputed data | G/C | G | 0.652 | 0.01 |
rs4082919 | 17 | 76377482 | PGS1 | Sequenom | G/T | T | 0.483 | 0.01 |
rs7255436 | 19 | 8433196 | ANGPTL4 | Exome Chip | A/C | A | 0.506 | 0.01 |
rs737337 | 19 | 11347493 | DOCK6 | Exome Chip | T/C | T | 0.900 | 0.02 |
rs181362 | 22 | 21932068 | UBE2L3 | Sequenom | C/T | C | 0.813 | 0.01 |
 | SNPs in risk scores 2a and 2b | |||||||
rs4846914 | 1 | 230295691 | GALNT2 | Sequenom | A/G | A | 0.606 | 0.02 |
rs17145738 | 7 | 72982874 | TBL2, BCL7B | Exome Chip | C/T | T | 0.124 | 0.03 |
rs17482753 | 8 | 19832646 | LPL | Exome Chip | G/T | T | 0.095 | 0.08 |
rs17321515 | 8 | 126486409 | TRIB1 | GWAS | A/G | G | 0.465 | 0.02 |
rs471364 | 9 | 15289578 | TTC39B | Exome Chip | T/C | T | 0.896 | 0.03 |
rs3890182 | 9 | 107647655 | ABCA1 | Exome Chip | G/A | G | 0.890 | 0.03 |
rs174547 | 11 | 61570783 | FADS1 | Exome Chip | T/C | T | 0.668 | 0.03 |
rs6589566 | 11 | 116652423 | ZNF259, APOA5 | GWAS | A/G | A | 0.924 | 0.05 |
rs2338104 | 12 | 109895168 | KCTD10 | Exome Chip | G/C | G | 0.520 | 0.03 |
rs1800588 | 15 | 58723675 | LIPC | Exome Chip | C/T | T | 0.207 | 0.05 |
rs3764261 | 16 | 56993324 | CETP | Exome Chip | C/A | A | 0.331 | 0.1 |
rs2271293 | 16 | 67902070 | NUTF2 | Exome Chip | G/A | A | 0.113 | 0.03 |
rs61755018 | 18 | 47109955 | LIPG | Imputed data | A/G | G | 0.007 | 0.14 |
rs2967605 | 19 | 8469738 | RAB11B | Exome Chip | C/T | C | 0.812 | 0.05 |
rs16988929 | 20 | 42904315 | GDAP1L1 | Imputed data | C/T | T | 0.002 | 0.01 |