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Table 2 Up-regulated genes on DNA microarray

From: Metabolic syndrome influences cardiac gene expression pattern at the transcript level in male ZDF rats

Gene function

Description [Gene symbol]

Acc. No.:

AVE log2

SD

P value

Fold change

Metabolism

Acyl-coa thioesterase 7 [Acot7]

NM_013214

0.75

0.34

0.021

1.69

Angiopoietin-like 4 [Angptl4]

NM_199115

0.83

0.25

0.007

1.78

Mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C [Mgat4c_predicted]

ENSRNOT00000005523

0.87

0.29

0.037

1.82

Carbonyl reductase 1 [Cbr1]

NM_019170

0.99

0.40

0.016

1.99

3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 [Hmgcs2]

NM_173094

1.05

0.25

0.004

2.07

Transglutaminase 1 [tgm1]

NM_031659

1.35

0.13

0.044

2.55

Cytosolic acyl-coa thioesterase 1 [Cte1]

NM_031315

1.88

0.41

0.003

3.69

Stress response

Cold inducible RNA binding protein [Cirbp]

NM_031147

0.77

0.21

0.005

1.71

Glutathione S-transferase Yc2 subunit [Yc2]

NM_001009920

0.86

0.16

0.002

1.82

Signal transduction, regulation of transcription

Calcium/calmodulin-dependent protein kinase II gamma [Camk2g]

NM_133605

0.75

0.21

0.006

1.68

Phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Pla2g7]

NM_001009353

1.45

0.84

0.041

2.74

Brain expressed X-linked 1 [Bex1]

NM_001037365

0.92

0.57

0.048

1.90

Fibroblast growth factor receptor substrate 3 [Frs3]

NM_001017382

1.05

0.04

0.018

2.07

Membrane proteins, receptors

Huntingtin-associated protein 1 [Hap1]

NM_024133

0.77

0.29

0.043

1.71

Membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) [RGD1560049_predicted]

ENSRNOT00000055194

1.10

0.45

0.016

2.15

Atpase, H+/K+ transporting, nongastric, alpha polypeptide [Atp12a]

NM_133517

1.39

0.19

0.006

2.61

Structural protein, cell adhesion

Spectrin beta 3 [Spnb3]

NM_019167

0.95

0.05

0.026

1.93

Aggrecan 1 [agc1]

NM_022190

1.06

0.09

0.037

2.08

Others

Similar to mucin 7, salivary [RGD1311530_predicted]

ENSRNOT00000014519

0.75

0.22

0.007

1.69

Leukocyte tyrosine kinase [Ltk_predicted]

ENSRNOT00000050055

0.77

0.04

0.021

1.70

Similar to RIKEN cdna 9130022B02 [Pck2_predicted]

ENSRNOT00000025260

0.78

0.28

0.042

1.72

Similar to hypothetical protein [Arid2_predicted]

ENSRNOT00000006970

0.79

0.20

0.004

1.73

Iroquois related homeobox 3 (Drosophila) [Irx3_predicted]

ENSRNOT00000043254

0.809

0.41

0.031

1.74

Hdac5 protein (Fragment) [Hdac5]

ENSRNOT00000028381

0.86

0.70

0.022

1.81

Ribonuclease, rnase A family, 1 (pancreatic) [Rnase1]

NM_001029904

0.90

0.22

0.004

1.86

Ring finger protein 24 [Rnf24_predicted]

ENSRNOT00000028869

0.92

0.22

0.037

1.89

Amyloid beta (A4) precursor protein-binding, family A, member 1 [Apba1]

NM_031779

0.96

0.36

0.044

1.94

CWF19-like 1, cell cycle control (S. Pombe) [Cwf19l1_predicted]

ENSRNOT00000017202

0.97

0.09

0.044

1.95

Similar to high density lipoprotein-binding protein [RGD1564237_predicted]

ENSRNOT00000009811

0.98

0.19

0.002

1.97

P21 (CDKN1A)-activated kinase 6 [Pak6_predicted]

ENSRNOT00000010471

0.10

0.08

0.036

2.00

Similar to nuclear body associated kinase 1a [Hipk2_predicted]

XM_342662

1.06

0.66

0.049

2.09

Cationic trypsinogen [LOC286911]

NM_173127

1.08

0.07

0.031

2.11

Chac, cation transport regulator-like 1 (E. Coli) [RGD1560049_predicted]

XM_342497

1.10

0.08

0.033

2.15

NTAK alpha2 [Nrg2]

D89996

1.13

0.10

0.042

2.18

Ubiquitin carboxy-terminal hydrolase L1 [Uchl1]

NM_017237

1.24

0.26

0.014

2.37

 

Claudin 19 [cldn19]

NM_001008514

1.43

0.12

0.037

2.70