Gene | SNP (literature) | SNP (dataset) | MAF (dataset) | ref | r2SNPs |
---|---|---|---|---|---|
Insulin resistance | |||||
PPARG | rs1801282 | rs1801282 | G: 0.13 | [14] | - |
IRS1 | rs2943634 | rs2943634 | A: 0.35 | [15] | - |
GCKR | rs780094 | rs780094 | T: 0.37 | [14] | - |
IGF1 | rs35767 | rs35767 | A: 0.16 | [14] | - |
GCK | rs4607517 | rs1799884 | T: 0.18 | [14] | 1 |
Abdominal obesity | |||||
FTO | rs1421085 | rs1421085 | C: 0.40 | [16] | - |
MC4R 1 | rs17782313 | rs17782313 | C: 0.25 | [16] | - |
Inflammation | |||||
IL6R | rs4537545 | rs4537545 | T: 0.39 | [17] | - |
LEPR | rs6700896 | rs1805096 | A: 0.38 | [17] | 0.89 |
CRP | rs7553007 | rs1341665 | A: 0.32 | [17] | 1 |
ADIPOQ | rs1648707 | rs182052 | A: 0.34 | [18] | 1 |
IL18 | rs1834481 | rs5744256 | G: 0.26 | [19] | 1 |
GCKR | rs780094 | rs780094 | T: 0.37 | [20] | - |
Triglycerides | |||||
AFF1 | rs442177 | rs3775214 | G: 0.43 | [21] | 0.96 |
APOB | rs673548 | rs673548 | A: 0.22 | [22] | - |
APOB | rs693 | rs693 | G: 0.50 | [23] | - |
APOA5-A4-C3-A1 | rs12286037 | rs12286037 | T: 0.08 | [24] | - |
APOA5 | rs6589566 | rs2075290 | C: 0.06 | [25] | 1 |
FADS1 | rs174548 | rs174548 | G: 0.29 | [21] | |
FADS1-2-3 | rs174547 | rs174577 | A: 0.35 | [26] | 1 |
GALNT2 | rs4846914 | rs4846914 | G: 0.41 | [23] | - |
LPL | rs328 | rs328 | G: 0.10 | [23] | - |
MLXIPL | rs17145738 | rs17145750 | T: 0.16 | [24] | 0.86 |
PLTP | rs7679 | rs6073952 | A: 0.20 | [26] | 0.82 |
TRIB1 | rs2954029 | rs2954029 | T: 0.47 | [26] | - |
CLIP2 | rs16996148 | rs16996148 | T: 0.10 | [24] | - |
GCKR | rs780094 | rs780094 | T: 0.37 | [27] | - |
ANGPTL3-DOCK7 | rs1748195 | rs1748197 | A: 0.35 | [24] | 1 |
ANGPTL3-DOCK7 | rs12130333 | rs12130333 | T: 0.24 | [23] | - |
HDL cholesterol | |||||
ABCA1 | rs1883025 | rs1883025 | T: 0.24 | [26] | - |
ABCA1 | rs3890182 | rs3890182 | A: 0.10 | [21] | - |
APOB | rs11902417 | rs11902417 | A: 0.24 | [21] | - |
CETP | rs1800775 | rs1800775 | A: 0.46 | [28] | - |
CETP | rs3764261 | rs3764261 | A: 0.31 | [29] | - |
FADS1 | rs174548 | rs174548 | G: 0.29 | [21] | - |
FADS1-2-3 | rs174547 | rs174577 | A: 0.35 | [26] | - |
GALNT2 | rs4846914 | rs4846914 | G: 0.41 | [23] | - |
LCAT | rs255052 | rs255052 | A: 0.17 | [24] | - |
LCAT | rs12449157 | rs1109166 | C: 0.18 | [21] | 0.94 |
LIPC | rs1800588 | rs1800588 | T: 0.22 | [23] | - |
LIPG | rs2156552 | rs2156552 | A: 0.16 | [21] | - |
LPL | rs328 | rs328 | G: 0.10 | [23] | - |
PLTP | rs7679 | rs6073952 | A: 0.20 | [26] | 0.82 |
MMAB MVK | rs2338104 | rs10774708 | A: 0.47 | [26] | 1 |
HNF4A | rs1800961 | rs1800961 | T: 0.04 | [26] | - |